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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002251.1_516_924_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

516 - 924

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGTGGTC

5'SS Class:

major

3'SS Sequence:

GCCCAATATTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAG

U12 Branch Point Sequence:

TTGAGGTTAACT

Flanking Amino Acid:

IRRGAEAKKLDGVGAKIAEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.1

40.1

Major BPS

59.9

0.25

1.6

59.3

47.1

Major PPT

58.9

0.2

54.9

39.2

Minor 5ss

32.6

-2

3.9

44.8

Minor BPS

49.8

0.06

2.5

76.34

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029076

Chromosome:

PEDO01002251.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029530

175 - 1207

1033