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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002303.1_4599_5072_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4599 - 5072

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAATGTT

5'SS Class:

major

3'SS Sequence:

CTGCCTGGTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

CATGCCATAAGA

Flanking Amino Acid:

AVRWHQKDSKSIWKAHYVTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

71.5

38.5

Major BPS

0.67

1.1

77.7

37.1

Major PPT

0.11

1.2

55.3

39.2

Minor 5ss

-1.1

3.5

58.4

46.2

Minor BPS

48.6

-0.1

61.16

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026745

Chromosome:

PEDO01002303.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029827

4236 - 6047

1812