Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002348.1_11158_11434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11158 - 11434

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

GTGGTTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

CAAAATTCAATC

Flanking Amino Acid:

MEKTDATSQPPQPDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

57.2

47.1

Major BPS

74.2

0.6

0.9

75.7

Major PPT

74.2

0.55

70.4

44.5

Minor 5ss

33.4

-1.9

3.6

43.6

45.1

Minor BPS

-0.4

1.6

46.45

36.1

Associated Gene:

Gene:

KANK4

Ensembl Gene ID:

ENSAPLG00000026847

Chromosome:

PEDO01002348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041225

207 - 14256

14050

ENSAPLT00000024747

207 - 14256

14050