About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002348.1_1798_2926_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1798 - 2926

Intron Length:
1129

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCGTGGG

5'SS Class:
major

3'SS Sequence:
GGTGCGTTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAG

U12 Branch Point Sequence:
CGGTGCTGAGCT

Flanking Amino Acid:
EGDVNVRAAQGGQTALMLGV

Intron Amino Acid Position:
904

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
63.3
43.1

Major BPS
52.2
0.06
1.6
51.1
46.3

Major PPT
65.4
0.35
1
57.3
43.2

Minor 5ss
25.6
-2.8
3.1
31.6
42.7

Minor BPS
45.3
-0.2
2.1
61.44
47.8

Associated Gene:

Gene:
KANK4

Ensembl Gene ID:

Chromosome:
PEDO01002348.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

207 - 14256
14050