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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002348.1_6049_6627_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6049 - 6627

Intron Length:
579

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACCAGA

5'SS Class:
major

3'SS Sequence:
ATTTTCCCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACAAAA

U12 Branch Point Sequence:
GCTTACAAAAGT

Flanking Amino Acid:
ATPGAEHKADRCKPSEDFLA

Intron Amino Acid Position:
753

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.2
68.9
43.8

Major BPS
60.3
0.26
1
65.5
28

Major PPT
79.6
0.67
0.8
71.5
35

Minor 5ss
44.3
-0.6
2.7
58.2
46

Minor BPS
42.8
-0.4
2.3
62.43
47

Associated Gene:

Gene:
KANK4

Ensembl Gene ID:

Chromosome:
PEDO01002348.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

207 - 14256
14050

207 - 14256
14050