Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002348.1_6859_8210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6859 - 8210

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCAAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GTGTCCTCAAAT

Flanking Amino Acid:

KNLQFVGVNGGYETTSSEDT

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

73.1

0.58

73.8

32.3

Major PPT

63.4

0.3

59.5

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

64.5

0.53

1.7

78.83

42.7

Associated Gene:

Gene:

KANK4

Ensembl Gene ID:

ENSAPLG00000026847

Chromosome:

PEDO01002348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041225

207 - 14256

14050

ENSAPLT00000024747

207 - 14256

14050