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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002367.1_195_436_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

195 - 436

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAAACGA

5'SS Class:

major

3'SS Sequence:

GAAATTACTTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATTAC

U12 Branch Point Sequence:

TTCTGCAGAAGA

Flanking Amino Acid:

IKIFDEKTGVIHKCSLGA*

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

58.7

40.4

Major BPS

58.2

0.21

49.8

34.7

Major PPT

47.3

-0.1

1.7

52.3

46.3

Minor 5ss

32.4

-2

3.2

39.1

40.5

Minor BPS

43.7

-0.4

2.3

60.88

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020160

Chromosome:

PEDO01002367.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025350

169 - 3408

3240