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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002367.1_2584_3238_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2584 - 3238

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTTTTGAC

5'SS Class:

weak_major

3'SS Sequence:

GTCAGGATCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTCCCTTATGT

Flanking Amino Acid:

AQRLVPAQKSCEATLIKRFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.2

55.1

35.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

59.1

0.21

50.3

42.6

Minor 5ss

35.6

-1.6

41.4

39.6

Minor BPS

64.7

0.54

1.9

85.49

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020160

Chromosome:

PEDO01002367.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025350

169 - 3408

3240