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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002367.1_540_2456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

540 - 2456

Intron Length:

1917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGTGC

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TTTGTTTCTATA

Flanking Amino Acid:

LCQDSMMKLKGIVAAARSKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

61.1

40.6

Major BPS

67.7

0.44

38.9

Major PPT

85.1

0.79

0.7

80.9

31.3

Minor 5ss

30.6

-2.2

3.4

41.2

45.5

Minor BPS

46.5

-0.2

1.9

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020160

Chromosome:

PEDO01002367.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025350

169 - 3408

3240