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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002400.1_3331_3665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3331 - 3665

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTCTCCTGACTC

Flanking Amino Acid:

RGFNPDDLKKGVFGRRLNVW

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

80.6

33.8

Major BPS

68.9

0.47

59.2

39.1

Major PPT

81.4

0.71

0.7

80.1

25.3

Minor 5ss

31.6

-2.1

39.4

46.1

Minor BPS

52.4

0.06

1.8

62.53

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020972

Chromosome:

PEDO01002400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022677

21 - 5242

5222