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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002400.1_4500_4596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4500 - 4596

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAA

U12 Branch Point Sequence:

ACATCTCCCACT

Flanking Amino Acid:

KTCKPRLVGQVFVGGSILRG

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

55.8

0.14

1.2

39.8

Major PPT

74.8

0.56

0.9

64.8

41.3

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

42.7

-0.4

2.1

60.01

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020972

Chromosome:

PEDO01002400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022677

21 - 5242

5222