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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002418.1_2620_2737_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2620 - 2737

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCTGCTGAG

5'SS Class:

weak_major

3'SS Sequence:

GCCGGCCTCGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

GCAGCGCTGACT

Flanking Amino Acid:

TLAAPSGALWSVNLGDNVEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.4

47.1

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

50.3

0.01

1.1

47.9

34.5

Minor 5ss

21.8

-3.3

3.9

23.1

37.6

Minor BPS

41.9

-0.5

2.3

57.18

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019409

Chromosome:

PEDO01002418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040030

367 - 2770

2404