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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002418.1_534_2390_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

534 - 2390

Intron Length:

1857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGACTGGA

5'SS Class:

major

3'SS Sequence:

CCACAGCTGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TCTGCATGACCA

Flanking Amino Acid:

QAEDEAVYFCVSSLSCPSAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

61.1

39.6

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

44.1

-0.3

1.7

45.9

Minor 5ss

32.3

-2

3.1

37.6

42.2

Minor BPS

46.1

-0.3

2.1

61.11

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019409

Chromosome:

PEDO01002418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040030

367 - 2770

2404