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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002418.1_955_1428_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

955 - 1428

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCTCTAAC

5'SS Class:

weak_major

3'SS Sequence:

TTCCCTGGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAG

U12 Branch Point Sequence:

TCCCTCTCCAGG

Flanking Amino Acid:

SLVHGTQNQMAALTQSDPKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.5

0.11

1.3

56.3

45.2

Major BPS

46.3

-0.2

1.7

60.4

45.8

Major PPT

72.4

0.5

64.6

41.3

Minor 5ss

32.9

-2

3.7

42.1

39.8

Minor BPS

38.8

-1

2.1

39.73

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026815

Chromosome:

PEDO01002418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039780

5 - 1547

1543