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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002426.1_296_578_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

296 - 578

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

GGCAGCAGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACAGAT

U12 Branch Point Sequence:

TAGCCAGCAGCA

Flanking Amino Acid:

ELYEEWIQASKSSQAPGPIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

65.1

40.7

Major BPS

0.1

50.3

35.4

Major PPT

52.5

0.06

1.1

43.2

42.1

Minor 5ss

30.8

-2.2

2.8

34.7

Minor BPS

36.5

-1

2.3

47.91

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018739

Chromosome:

PEDO01002426.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031623

184 - 1663

1480