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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002428.1_1561_2405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1561 - 2405

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACGCAC

5'SS Class:

major

3'SS Sequence:

GTTTTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCAATAATTT

Flanking Amino Acid:

KVKNVGIFLKNEDEEEEEEE

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.2

40.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

81.6

0.71

0.8

73.9

36.8

Minor 5ss

31.1

-2.2

3.3

45.6

Minor BPS

43.2

-0.4

2.2

67.66

Associated Gene:

Gene:

SUPT16H

Ensembl Gene ID:

ENSAPLG00000010157

Chromosome:

PEDO01002428.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037049

548 - 8907

8360

ENSAPLT00000010570

27 - 8673

8647