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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002437.1_2194_2362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2194 - 2362

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

TTGCTCTGAGCA

Flanking Amino Acid:

VEMDEFPVEGETAEQMDARR

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

58.2

0.2

1.1

49.1

Major PPT

69.4

0.44

66.4

39.4

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

51.5

0.04

1.7

65.55

40.7

Associated Gene:

Gene:

PES1

Ensembl Gene ID:

ENSAPLG00000014852

Chromosome:

PEDO01002437.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044010

159 - 3513

3355

ENSAPLT00000026977

52 - 3493

3442

ENSAPLT00000015490

52 - 3496

3445