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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002437.1_3110_3221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3110 - 3221

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTC

5'SS Class:

major

3'SS Sequence:

GGTTTCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCCAGCTGATA

Flanking Amino Acid:

LLAMQRGEDPGEESEEDEEE

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

65.8

39.9

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

0.59

0.9

70.4

36.3

Minor 5ss

29.9

-2.3

3.4

41.5

45.2

Minor BPS

37.1

-1

2.2

45.06

37.9

Associated Gene:

Gene:

PES1

Ensembl Gene ID:

ENSAPLG00000014852

Chromosome:

PEDO01002437.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026977

52 - 3493

3442

ENSAPLT00000015490

52 - 3496

3445

ENSAPLT00000044010

159 - 3513

3355