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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002440.1_2523_2819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2523 - 2819

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCAACTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CCCTTTGCAACT

Flanking Amino Acid:

DTSRGSSQLGAVEFAAAPNT

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

75.9

0.58

0.9

71.8

38.2

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

-0.3

2.1

58.3

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024921

Chromosome:

PEDO01002440.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041450

478 - 4056

3579