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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002448.1_2200_2277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2200 - 2277

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CTTCTCCTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TCTGGCTGACGC

Flanking Amino Acid:

AAGDSLPPDIDEIKALLTAL

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

81.8

0.72

0.7

76.7

25.3

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

39.4

-0.8

2.3

50.11

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021440

Chromosome:

PEDO01002448.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040027

131 - 3316

3186

ENSAPLT00000027505

685 - 5203

4519