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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002448.1_890_973_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

890 - 973

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCACGG

5'SS Class:

weak_major

3'SS Sequence:

GCGCTGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GGGGCCTGACCG

Flanking Amino Acid:

ELYNKIQIVKVEKLIHPLLY

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.2

44.3

45.2

Major BPS

51.1

0.03

1.2

39.9

Major PPT

56.3

0.14

1.1

50.2

39.3

Minor 5ss

30.1

-2.3

3.3

38.8

46.3

Minor BPS

44.8

-0.5

1.9

45.67

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021440

Chromosome:

PEDO01002448.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040027

131 - 3316

3186

ENSAPLT00000027505

685 - 5203

4519