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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002474.1_1700_1776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1700 - 1776

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

CCTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGCCCCTCACTC

Flanking Amino Acid:

WSAIPFEDYAELPYTKDVVE

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.47

0.8

61.5

Minor 5ss

39.7

-1.2

3.1

53.4

43.7

Minor BPS

45.8

-0.3

1.8

51.26

39.7

Associated Gene:

Gene:

THOC5

Ensembl Gene ID:

ENSAPLG00000022431

Chromosome:

PEDO01002474.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022631

1000 - 2957

1958