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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002474.1_2239_2414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2239 - 2414

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCGCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CCTGGTGTGACG

Flanking Amino Acid:

GLHFPKEQPQHTVTADNSLS

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.9

81.9

34.2

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

67.8

0.4

0.8

57.6

33.3

Minor 5ss

27.4

-2.6

4.1

43.8

43.9

Minor BPS

38.2

-1

2.3

40.81

44.7

Associated Gene:

Gene:

THOC5

Ensembl Gene ID:

ENSAPLG00000022431

Chromosome:

PEDO01002474.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022631

1000 - 2957

1958