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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002483.1_463_961_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

463 - 961

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCATGACCA

5'SS Class:

weak_major

3'SS Sequence:

GTCCAGGCAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCCAG

U12 Branch Point Sequence:

TCCCTCTCCAGG

Flanking Amino Acid:

LGAESGSWSLLTQQASKSAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.5

48.2

41.7

Major BPS

46.3

-0.2

1.7

60.4

45.8

Major PPT

54.4

0.1

1.1

47.2

40.1

Minor 5ss

30.9

-2.2

4.1

49.8

Minor BPS

38.8

-1

2.1

39.73

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028799

Chromosome:

PEDO01002483.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031387

390 - 1648

1259