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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002485.1_2466_2762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2466 - 2762

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTCC

5'SS Class:

major

3'SS Sequence:

GGCTTCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAT

U12 Branch Point Sequence:

GATGGCACAGCC

Flanking Amino Acid:

TAVSRIQSPKRFADFVGGAS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

67.5

Major BPS

68.7

0.46

1.3

59.3

47.1

Major PPT

73.8

0.54

0.9

64.9

41.3

Minor 5ss

43.5

-0.7

3.1

44.7

Minor BPS

36.5

-1

2.2

45.81

42.3

Associated Gene:

Gene:

NEMP1

Ensembl Gene ID:

ENSAPLG00000008593

Chromosome:

PEDO01002485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008957

2269 - 5955

3687

ENSAPLT00000043711

508 - 5955

5448

ENSAPLT00000027664

508 - 5955

5448