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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002485.1_3371_3448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3371 - 3448

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

CTGGACCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAA

U12 Branch Point Sequence:

CTCTCCTGGACC

Flanking Amino Acid:

LLCYMLLVGLLLGLLLMYSG

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

0.9

35.7

Major BPS

49.5

-0

1.3

53.9

41.5

Major PPT

67.2

0.39

58.7

Minor 5ss

43.1

-0.8

55.7

43.3

Minor BPS

64.5

0.44

1.5

70.42

41.4

Associated Gene:

Gene:

NEMP1

Ensembl Gene ID:

ENSAPLG00000008593

Chromosome:

PEDO01002485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008957

2269 - 5955

3687