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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002485.1_3778_3990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3778 - 3990

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CTCCTCTTGATT

Flanking Amino Acid:

FYVMSKAMPKRSPVYFLLVG

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

82.2

0.72

0.7

76.4

32.2

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

61.7

0.45

1.3

71.44

40.3

Associated Gene:

Gene:

NEMP1

Ensembl Gene ID:

ENSAPLG00000008593

Chromosome:

PEDO01002485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043711

508 - 5955

5448

ENSAPLT00000027664

508 - 5955

5448

ENSAPLT00000008957

2269 - 5955

3687