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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002485.1_4966_5073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4966 - 5073

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

GTGCCCACATGT

Flanking Amino Acid:

QWHDIWTRVQIRINSSRGVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

69.9

0.45

36.7

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

39.2

-0.7

2.1

55.69

45.7

Associated Gene:

Gene:

NEMP1

Ensembl Gene ID:

ENSAPLG00000008593

Chromosome:

PEDO01002485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043711

508 - 5955

5448

ENSAPLT00000027664

508 - 5955

5448

ENSAPLT00000008957

2269 - 5955

3687