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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002485.1_5196_5417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5196 - 5417

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CCTCGTCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TGCTGCTGAGCG

Flanking Amino Acid:

GQRQDQGAATGAVESVIELH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

64.4

0.32

63.6

31.8

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

45.3

-0.4

2.1

52.99

47.2

Associated Gene:

Gene:

NEMP1

Ensembl Gene ID:

ENSAPLG00000008593

Chromosome:

PEDO01002485.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043711

508 - 5955

5448

ENSAPLT00000008957

2269 - 5955

3687