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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002508.1_4571_20970_R

Intron Information:

Intron Rank:

141691

Intron Class:

major

Intron Phase:

Intron Coordinates:

4571 - 20970

Intron Length:

16400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GAGAATTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

58.5

41.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

-1.8

3.8

49.3

47.2

Minor BPS

56.3

0.28

1.6

67.94

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023584

Chromosome:

PEDO01002508.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047657

2166 - 21424

19259