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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002512.1_1052_2010_F

Intron Information:

Intron Rank:

130381

Intron Class:

major

Intron Phase:

Intron Coordinates:

1052 - 2010

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

CTCGCGCTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

87.4

0.84

0.7

84.9

29.9

Minor 5ss

-2.3

3.1

41.6

Minor BPS

43.6

-0.4

2.4

63.31

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020124

Chromosome:

PEDO01002512.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047696

21 - 3619

3599