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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002532.1_3555_3668_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3555 - 3668

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGCGTGAG

5'SS Class:

weak_major

3'SS Sequence:

GGTGCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGGCAG

U12 Branch Point Sequence:

GGTGCCCCCACA

Flanking Amino Acid:

PHRELFAINHPALSSAEAEL

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.3

50.8

42.2

Major BPS

32.5

-1.1

1.6

30.7

Major PPT

63.2

0.3

0.9

54.1

36.7

Minor 5ss

27.4

-2.6

3.2

34.8

41.9

Minor BPS

41.7

-0.6

2.2

54.1

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026294

Chromosome:

PEDO01002532.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040099

95 - 4239

4145