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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002532.1_749_820_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
749 - 820

Intron Length:
72

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGCCT

5'SS Class:
major

3'SS Sequence:
GCCTCTCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACCCAC

U12 Branch Point Sequence:
ACAGCCAAACCC

Flanking Amino Acid:
TSNLQCINEQLLSPRVSALA

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.2
67
44.2

Major BPS
48.3
-0.1
1.1
56.1
31

Major PPT
71.2
0.48
0.8
64.3
31.1

Minor 5ss
38.9
-1.2
3.4
57.5
46.7

Minor BPS
39.6
-0.8
2.1
45.97
42.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01002532.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95 - 4239
4145