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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002539.1_460_534_F

Intron Information:

Intron Rank:

141423

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

460 - 534

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

GTG|GTGGCCGCC

5'SS Class:

weak_major

3'SS Sequence:

CACCACTGCGGTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

ATGGCCACCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

45.3

38.5

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

27.7

-1.2

3.2

37.7

33.9

Minor 5ss

36.4

-1.5

3.6

47.2

Minor BPS

43.1

-0.4

2.2

63.47

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026160

Chromosome:

PEDO01002539.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042981

21 - 986

966