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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002545.1_332_708_F

Intron Information:

Intron Rank:

127362

Intron Class:

major

Intron Phase:

Intron Coordinates:

332 - 708

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TGAGTGTGAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

37.9

-1

2.3

40.98

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018675

Chromosome:

PEDO01002545.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029300

21 - 1077

1057