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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002554.1_4273_4398_F

Intron Information:

Intron Rank:

147712

Intron Class:

major

Intron Phase:

Intron Coordinates:

4273 - 4398

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGC

5'SS Class:

major

3'SS Sequence:

CCGTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAGAG

U12 Branch Point Sequence:

GCGGGCAGAGGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

60.1

41.9

Major BPS

37.1

-0.8

1.4

26.1

36.2

Major PPT

69.7

0.44

0.9

61.8

34.9

Minor 5ss

37.4

-1.4

3.3

49.7

46.9

Minor BPS

28.4

-1.6

1.9

28.23

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029499

Chromosome:

PEDO01002554.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027934

4134 - 13035

8902