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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002554.1_4504_11528_F

Intron Information:

Intron Rank:

147713

Intron Class:

major

Intron Phase:

Intron Coordinates:

4504 - 11528

Intron Length:

7025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

51.7

0.04

1.4

45.5

47.5

Major PPT

100

1.12

0.4

100

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029499

Chromosome:

PEDO01002554.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037878

4237 - 13035

8799

ENSAPLT00000027934

4134 - 13035

8902