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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_1441_1527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1441 - 1527

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

CCCCTGTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

TGTCCCCCCCCT

Flanking Amino Acid:

IPDCYTFTITITFDNKAHSG

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

66.2

39.6

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

72.2

0.5

0.9

63.4

36.9

Minor 5ss

31.7

-2.1

3.3

46.2

42.2

Minor BPS

32.4

-1.2

3.6

63.5

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031646

124 - 2486

2363

ENSAPLT00000018554

74 - 3581

3508

ENSAPLT00000046637

21 - 4581

4561

ENSAPLT00000012866

67 - 3984

3918

ENSAPLT00000037538

21 - 4741

4721

ENSAPLT00000035647

67 - 3984

3918