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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_1441_1716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1441 - 1716

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

GCGTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

CCCTCGCTGATG

Flanking Amino Acid:

DPGLLHLHHHRDNSFRLFFD

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

66.2

39.6

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

69.7

0.44

61.9

39.9

Minor 5ss

31.7

-2.1

3.3

46.2

42.2

Minor BPS

40.7

-0.8

2.3

42.18

43.7

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018209

324 - 4073

3750