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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_2445_2746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2445 - 2746

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TTCCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGGAGTTTGATC

Flanking Amino Acid:

RYLTFFQKYNILIVTLRVAL

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

66.6

39.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

74.4

0.55

0.7

65.8

30.3

Minor 5ss

-2.4

3.1

33.7

Minor BPS

46.8

-0.2

1.8

54.24

38.5

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018209

324 - 4073

3750

ENSAPLT00000046637

21 - 4581

4561

ENSAPLT00000012866

67 - 3984

3918

ENSAPLT00000037538

21 - 4741

4721

ENSAPLT00000035647

67 - 3984

3918

ENSAPLT00000018554

74 - 3581

3508