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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_265_339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

265 - 339

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CAGCCCCTGAGG

Flanking Amino Acid:

YDHVFYTVEKYLAIPNETIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

74.8

0.56

0.9

69.1

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

42.3

-0.7

41.54

43.1

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035647

67 - 3984

3918

ENSAPLT00000031646

124 - 2486

2363

ENSAPLT00000012866

67 - 3984

3918