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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_265_665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

265 - 665

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

CTTCCCTGAAGG

Flanking Amino Acid:

LRPRLLHRGEDCLGVDPEDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

82.9

0.74

0.7

77.4

24.6

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

53.4

-0

1.9

61.75

45.7

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046637

21 - 4581

4561

ENSAPLT00000037538

21 - 4741

4721