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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_2870_3121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2870 - 3121

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGCTC

5'SS Class:

major

3'SS Sequence:

CTTCCCGCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCGAC

U12 Branch Point Sequence:

TGTCCGGCAGCT

Flanking Amino Acid:

WIVLGPYHVKFRSLSMVSEC

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

56.9

42.1

Major BPS

43.5

-0.4

1.4

37.8

41.4

Major PPT

70.6

0.46

0.9

61.5

34.9

Minor 5ss

28.9

-2.4

3.5

41.6

45.1

Minor BPS

37.6

-0.8

2.7

62.65

46.8

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012866

67 - 3984

3918

ENSAPLT00000046637

21 - 4581

4561

ENSAPLT00000037538

21 - 4741

4721

ENSAPLT00000018554

74 - 3581

3508