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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002584.1_754_1178_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

754 - 1178

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAATCGC

5'SS Class:

major

3'SS Sequence:

AGCTGTGGCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCCAG

U12 Branch Point Sequence:

GTGCTGGGAGCT

Flanking Amino Acid:

SYKNFTLKFHKEVKFPAAGA

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

63.2

41.7

Major BPS

45.8

-0.2

1.6

58.2

40.4

Major PPT

44.3

-0.3

1.7

45.9

45.3

Minor 5ss

35.6

-1.6

44.4

37.5

Minor BPS

33.1

-1.2

2.4

50.42

43.4

Associated Gene:

Gene:

MCOLN1

Ensembl Gene ID:

ENSAPLG00000012338

Chromosome:

PEDO01002584.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012866

67 - 3984

3918