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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002587.1_3646_3749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3646 - 3749

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAG

U12 Branch Point Sequence:

CTCTCCCGAGCA

Flanking Amino Acid:

LVWSNGKVTADPFVKVYLLQ

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

-0.1

1.6

46.5

Major PPT

66.3

0.37

62.4

33.2

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

46.7

-0.2

60.97

44.8

Associated Gene:

Gene:

SYT12

Ensembl Gene ID:

ENSAPLG00000003157

Chromosome:

PEDO01002587.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003203

465 - 5677

5213