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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002602.1_173_338_R

Intron Information:

Intron Rank:

148461

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

173 - 338

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-GT

5'SS Sequence:

CAT|GTGTGCTGC

5'SS Class:

weak_major

3'SS Sequence:

GTGTGTTGCGTGT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

ATGTGCTGCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.1

54.8

39.2

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

19.6

-1.7

4.1

42.4

43.2

Minor 5ss

47.3

-0.3

2.7

62.4

42.9

Minor BPS

42.6

-0.7

2.2

50.12

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027250

Chromosome:

PEDO01002602.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047581

21 - 1087

1067