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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002606.1_511_581_R


Intron Information:

Intron Rank:
143005

Intron Class:
major

Intron Phase:

Intron Coordinates:
511 - 581

Intron Length:
71

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGCACC

5'SS Class:
strong_major

3'SS Sequence:
CGCTCTCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGGTCAC

U12 Branch Point Sequence:
CCTGGGTCACGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.75
1
71.5
38.5

Major BPS
46.8
-0.2
1.4
48.8
46.3

Major PPT
70.5
0.46
0.8
61.4
35

Minor 5ss
40.8
-1
2.8
50.5
40

Minor BPS
27.9
-1.7
2.4
32.89
42.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01002606.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 1079
1059

21 - 1079
1059