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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002680.1_456_583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

456 - 583

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCCAC

U12 Branch Point Sequence:

CTGCGCCCACCC

Flanking Amino Acid:

APALAACGCKVPMISGRGLG

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

-0.3

1.2

47.5

37.7

Major PPT

65.1

0.34

0.9

56.7

33.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

35.9

-1

2.2

44.41

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031013

Chromosome:

PEDO01002680.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046392

21 - 1670

1650