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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002692.1_1214_1302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1214 - 1302

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGAGCG

5'SS Class:

major

3'SS Sequence:

CCCCCCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTACGACCC

Flanking Amino Acid:

TFISTVFYNTDLFEYKFINS

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

54.9

42.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

75.2

0.57

0.8

68.2

25.3

Minor 5ss

30.2

-2.3

3.5

39.9

45.6

Minor BPS

-0.4

2.2

64.95

40.2

Associated Gene:

Gene:

SV2A

Ensembl Gene ID:

ENSAPLG00000004387

Chromosome:

PEDO01002692.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004500

1 - 3306

3306