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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002692.1_1693_2335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1693 - 2335

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCG

5'SS Class:

major

3'SS Sequence:

TCTCACCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCTCTCTCACCC

Flanking Amino Acid:

MMAVWFTMSFSYYGLTVWFP

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

44.7

Major BPS

72.7

0.56

30.1

Major PPT

72.6

0.51

0.8

65.9

29.7

Minor 5ss

24.2

-3

3.2

29.7

43.3

Minor BPS

46.7

-0.2

1.8

55.1

43.3

Associated Gene:

Gene:

SV2A

Ensembl Gene ID:

ENSAPLG00000004387

Chromosome:

PEDO01002692.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004500

1 - 3306

3306